panjose/Co-Scientist
Scientific agent skills for Claude Code and Codex that turn research goals into auditable hypothesis generation, review, ranking, evolution, and synthesis.
ARCHETYPE
Skill Collector
Ten-plus skills loaded on demand. A procedural-knowledge library.
Copy this rig
# review before running: this installs third-party code
$ npx degit panjose/Co-Scientist/skills ./rig-co-scientist/skills MCP servers are added to Claude Code at local scope; env vars are shown as YOUR_… placeholders — we never store values. Files are fetched with degit into a separate folder so you can review before merging.
$ npx degit panjose/Co-Scientist/skills/co-scientist-pipeline .claude/skills/co-scientist-pipeline $ npx degit panjose/Co-Scientist/skills/convergence-check .claude/skills/convergence-check $ npx degit panjose/Co-Scientist/skills/dashboard-snapshot .claude/skills/dashboard-snapshot $ npx degit panjose/Co-Scientist/skills/evolution-strategy-supervisor .claude/skills/evolution-strategy-supervisor $ npx degit panjose/Co-Scientist/skills/hypothesis-deep-verification .claude/skills/hypothesis-deep-verification $ npx degit panjose/Co-Scientist/skills/hypothesis-evolution-loop .claude/skills/hypothesis-evolution-loop $ npx degit panjose/Co-Scientist/skills/hypothesis-evolve-coherence .claude/skills/hypothesis-evolve-coherence $ npx degit panjose/Co-Scientist/skills/hypothesis-evolve-combination .claude/skills/hypothesis-evolve-combination $ npx degit panjose/Co-Scientist/skills/hypothesis-evolve-feasibility .claude/skills/hypothesis-evolve-feasibility $ npx degit panjose/Co-Scientist/skills/hypothesis-evolve-grounding .claude/skills/hypothesis-evolve-grounding $ npx degit panjose/Co-Scientist/skills/hypothesis-evolve-inspiration .claude/skills/hypothesis-evolve-inspiration $ npx degit panjose/Co-Scientist/skills/hypothesis-evolve-out-of-box .claude/skills/hypothesis-evolve-out-of-box $ npx degit panjose/Co-Scientist/skills/hypothesis-evolve-simplification .claude/skills/hypothesis-evolve-simplification $ npx degit panjose/Co-Scientist/skills/hypothesis-full-review .claude/skills/hypothesis-full-review $ npx degit panjose/Co-Scientist/skills/hypothesis-generate-assumptions .claude/skills/hypothesis-generate-assumptions $ npx degit panjose/Co-Scientist/skills/hypothesis-generate-debate .claude/skills/hypothesis-generate-debate $ npx degit panjose/Co-Scientist/skills/hypothesis-generate-literature .claude/skills/hypothesis-generate-literature $ npx degit panjose/Co-Scientist/skills/hypothesis-generation-pipeline .claude/skills/hypothesis-generation-pipeline $ npx degit panjose/Co-Scientist/skills/hypothesis-initial-review .claude/skills/hypothesis-initial-review $ npx degit panjose/Co-Scientist/skills/hypothesis-observation-review .claude/skills/hypothesis-observation-review $ npx degit panjose/Co-Scientist/skills/hypothesis-placement-tournament .claude/skills/hypothesis-placement-tournament $ npx degit panjose/Co-Scientist/skills/hypothesis-proximity-update .claude/skills/hypothesis-proximity-update $ npx degit panjose/Co-Scientist/skills/hypothesis-ranked-tournament .claude/skills/hypothesis-ranked-tournament $ npx degit panjose/Co-Scientist/skills/hypothesis-ranking-pipeline .claude/skills/hypothesis-ranking-pipeline $ npx degit panjose/Co-Scientist/skills/hypothesis-review-pipeline .claude/skills/hypothesis-review-pipeline $ npx degit panjose/Co-Scientist/skills/hypothesis-review-summary .claude/skills/hypothesis-review-summary $ npx degit panjose/Co-Scientist/skills/hypothesis-simulation-review .claude/skills/hypothesis-simulation-review $ npx degit panjose/Co-Scientist/skills/insights-from-reviews .claude/skills/insights-from-reviews $ npx degit panjose/Co-Scientist/skills/island-select .claude/skills/island-select $ npx degit panjose/Co-Scientist/skills/literature-search .claude/skills/literature-search $ npx degit panjose/Co-Scientist/skills/ranking-elo-update .claude/skills/ranking-elo-update $ npx degit panjose/Co-Scientist/skills/research-config .claude/skills/research-config $ npx degit panjose/Co-Scientist/skills/research-overview-pipeline .claude/skills/research-overview-pipeline $ npx degit panjose/Co-Scientist/skills/run-policy-router .claude/skills/run-policy-router $ npx degit panjose/Co-Scientist/skills/strategy-router .claude/skills/strategy-router
This rig commits no guardrails. Here is the community baseline instead — the deny/ask rules most often found across all 6,974 rigs:
{
"permissions": {
"deny": [
"Read(./.env)",
"Read(**/.env)",
"Read(~/.ssh/**)",
"Bash(rm -rf *)",
"Read(**/*.pem)",
"Bash(rm -rf /)",
"Bash(git push --force:*)",
"Bash(sudo *)",
"Read(~/.aws/**)",
"Bash(rm -rf /*)",
"Read(./.env.*)",
"Read(.env)",
"Bash(git push --force*)",
"Bash(rm -rf:*)",
"Read(**/.env.*)",
"Read(**/*.key)",
"Bash(sudo:*)",
"Bash(git reset --hard*)",
"Bash(git reset --hard:*)",
"Read(.env.*)"
],
"ask": [
"Bash(git push:*)",
"Bash(git push *)",
"Bash(git commit:*)",
"Bash(rm *)",
"Bash(rm:*)",
"Bash(npm publish:*)",
"Bash(wget *)",
"Bash(git rebase *)",
"Bash(gh pr merge *)",
"Bash(git commit *)"
]
}
} Skills (35)
co-scientist-pipelineconvergence-checkdashboard-snapshotevolution-strategy-supervisorhypothesis-deep-verificationhypothesis-evolution-loophypothesis-evolve-coherencehypothesis-evolve-combinationhypothesis-evolve-feasibilityhypothesis-evolve-groundinghypothesis-evolve-inspirationhypothesis-evolve-out-of-boxhypothesis-evolve-simplificationhypothesis-full-reviewhypothesis-generate-assumptionshypothesis-generate-debatehypothesis-generate-literaturehypothesis-generation-pipelinehypothesis-initial-reviewhypothesis-observation-reviewhypothesis-placement-tournamenthypothesis-proximity-updatehypothesis-ranked-tournamenthypothesis-ranking-pipelinehypothesis-review-pipelinehypothesis-review-summaryhypothesis-simulation-reviewinsights-from-reviewsisland-selectliterature-searchranking-elo-updateresearch-configresearch-overview-pipelinerun-policy-routerstrategy-router
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